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1

Integrated omics approaches in plant systems biology

Atsushi Fukushima, Miyako Kusano, Henning Redestig, Masanori Arita, Kazuki Saito

Journal:

Current Opinion in Chemical Biology

Année:

2009

Langue:

english

Fichier:

PDF, 357 KB

english, 2009

2

SPLASH, a hashed identifier for mass spectra

Wohlgemuth, Gert, Mehta, Sajjan S, Mejia, Ramon F, Neumann, Steffen, Pedrosa, Diego, Pluskal, Tomáš, Schymanski, Emma L, Willighagen, Egon L, Wilson, Michael, Wishart, David S, Arita, Masanori, Dorres

Journal:

Nature Biotechnology

Année:

2016

Langue:

english

Fichier:

PDF, 118 KB

english, 2016

3

DNA sequence design using templates

Masanori Arita, Satoshi Kobayashi

Journal:

New Generation Computing

Année:

2002

Langue:

english

Fichier:

PDF, 852 KB

english, 2002

4

Databases on Food Phytochemicals and Their Health-Promoting Effects

Scalbert, Augustin, Andres-Lacueva, Cristina, Arita, Masanori, Kroon, Paul, Manach, Claudine, Urpi-Sarda, Mireia, Wishart, David

Journal:

Journal of Agricultural and Food Chemistry

Année:

2011

Langue:

english

Fichier:

PDF, 954 KB

english, 2011

5

MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis

Tsugawa, Hiroshi, Cajka, Tomas, Kind, Tobias, Ma, Yan, Higgins, Brendan, Ikeda, Kazutaka, Kanazawa, Mitsuhiro, VanderGheynst, Jean, Fiehn, Oliver, Arita, Masanori

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 976 KB

english, 2015

6

Genomic characterization of a fructophilic bee symbiont Lactobacillus kunkeei reveals its niche-specific adaptation

Maeno, Shintaro, Tanizawa, Yasuhiro, Kanesaki, Yu, Kubota, Eri, Kumar, Himanshu, Dicks, Leon, Salminen, Seppo, Nakagawa, Junichi, Arita, Masanori, Endo, Akihito

Journal:

Systematic and Applied Microbiology

Année:

2016

Langue:

english

Fichier:

PDF, 1.07 MB

english, 2016

7

Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri

TANIZAWA, Yasuhiro, KOBAYASHI, Hisami, KAMINUMA, Eli, SAKAMOTO, Mitsuo, OHKUMA, Moriya, NAKAMURA, Yasukazu, ARITA, Masanori, TOHNO, Masanori

Journal:

Bioscience of Microbiota Food and Health

Année:

2017

Langue:

english

Fichier:

PDF, 751 KB

english, 2017

8

Is the atlas size associated with the pathophysiology of symptomatic spinal canal stenosis at the C1 level?

Yamahata, Hitoshi, Niiro, Tadaaki, Mori, Masanao, Yamaguchi, Satoshi, Yonenaga, Masanori, Sugata, Jun, Hiwatari, Takaaki, Okada, Tomohisa, Atsuchi, Masamichi, Arita, Kazunori, Yoshimoto, Koji

Journal:

Journal of Clinical Neuroscience

Année:

2018

Langue:

english

Fichier:

PDF, 262 KB

english, 2018

9

Interrupting Characteristics of Series Connection of Thermal Puffer Gas Circuit Breaker and Vacuum Circuit Breaker

Sato, Takashi, Arita, Hiroshi, Tsukushi, Masanori, Kurosawa, Yukio

Journal:

IEEJ Transactions on Power and Energy

Année:

1993

Fichier:

PDF, 1.40 MB

1993

10

Systematic Multi-Omics Integration (MOI) Approach in Plant Systems Biology

Jamil, Ili Nadhirah, Remali, Juwairiah, Azizan, Kamalrul Azlan, Nor Muhammad, Nor Azlan, Arita, Masanori, Goh, Hoe-Han, Aizat, Wan Mohd

Journal:

Frontiers in Plant Science

Année:

2020

Fichier:

PDF, 680 KB

2020

11

ChemInform Abstract: (-)-Cercosporamide Derivatives as Novel Antihyperglycemic Agents.

Akihiro Furukawa, Tsuyoshi Arita, Susumu Satoh, Kazushi Araki, Masanori Kuroha, Jun Ohsumi

Journal:

Année:

2009

Fichier:

PDF, 18 KB

2009

12

MassBank: a public repository for sharing mass spectral data for life sciences

Hisayuki Horai, Masanori Arita, Shigehiko Kanaya, Yoshito Nihei, Tasuku Ikeda, Kazuhiro Suwa, Yuya Ojima, Kenichi Tanaka, Satoshi Tanaka, Ken Aoshima, Yoshiya Oda, Yuji Kakazu, Miyako Kusano, Takayuki

Journal:

Journal of Mass Spectrometry

Année:

2010

Langue:

english

Fichier:

PDF, 490 KB

english, 2010

13

Bistable stochastic processes in the -exponential family

Yoshihiko Hasegawa, Masanori Arita

Journal:

Physica A: Statistical Mechanics and its Applications

Année:

2010

Langue:

english

Fichier:

PDF, 736 KB

english, 2010

14

Noise-intensity fluctuation in Langevin model and its higher-order Fokker–Planck equation

Yoshihiko Hasegawa, Masanori Arita

Journal:

Physica A: Statistical Mechanics and its Applications

Année:

2011

Langue:

english

Fichier:

PDF, 1021 KB

english, 2011

15

(−)-Cercosporamide derivatives as novel antihyperglycemic agents

Akihiro Furukawa, Tsuyoshi Arita, Susumu Satoh, Kazushi Araki, Masanori Kuroha, Jun Ohsumi

Journal:

Bioorganic & Medicinal Chemistry Letters

Année:

2009

Langue:

english

Fichier:

PDF, 150 KB

english, 2009

16

Discovery of a novel selective PPARγ modulator from (−)-Cercosporamide derivatives

Akihiro Furukawa, Tsuyoshi Arita, Susumu Satoh, Kenji Wakabayashi, Shinko Hayashi, Yumi Matsui, Kazushi Araki, Masanori Kuroha, Jun Ohsumi

Journal:

Bioorganic & Medicinal Chemistry Letters

Année:

2010

Langue:

english

Fichier:

PDF, 304 KB

english, 2010

17

All systems go: launching cell simulation fueled by integrated experimental biology data

Masanori Arita, Martin Robert, Masaru Tomita

Journal:

Current Opinion in Biotechnology

Année:

2005

Langue:

english

Fichier:

PDF, 149 KB

english, 2005

18

What can metabolomics learn from genomics and proteomics?

Journal:

Current Opinion in Biotechnology

Année:

2009

Langue:

english

Fichier:

PDF, 144 KB

english, 2009

19

Metabolic reconstruction using shortest paths

Journal:

Simulation Practice and Theory

Année:

2000

Langue:

english

Fichier:

PDF, 185 KB

english, 2000

20

GC/MS based metabolomics: development of a data mining system for metabolite identification by using soft independent modeling of class analogy (SIMCA)

Hiroshi Tsugawa, Yuki Tsujimoto, Masanori Arita, Takeshi Bamba, Eiichiro Fukusaki

Journal:

BMC Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 869 KB

english, 2011

21

Reconstructing phylogeny from metabolic substrate-product relationships

Che-Wei Chang, Ping-Chiang Lyu, Masanori Arita

Journal:

BMC Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 2.89 MB

english, 2011

22

Metabolomic correlation-network modules inArabidopsisbased on a graph-clustering approach

Atsushi Fukushima, Miyako Kusano, Henning Redestig, Masanori Arita, Kazuki Saito

Journal:

BMC Systems Biology

Année:

2011

Langue:

english

Fichier:

PDF, 1.98 MB

english, 2011

23

Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database

Masanori Arita, Kazuhiro Suwa

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 380 KB

english, 2008

24

Method of ranking of heart valve characteristics at mitral position based on statistical model analysis

Makoto Arita, Kiyotaka Iwasaki, Mitsuo Umezu, Masanori Yoshida, Tetsuo Fujimoto, Hisayoshi Suma, Tadashi Isomura

Journal:

Journal of Artificial Organs

Année:

2001

Langue:

english

Fichier:

PDF, 589 KB

english, 2001

25

Fatty Acid Composition of Plasma, Erythrocytes and Adipose: Their Correlations and Effects of Age and Sex

Tokuhiro Ogura, Hideho Takada, Masashi Okuno, Hiroaki Kitade, Takashi Matsuura, Masanori Kwon, Seizaburo Arita, Kei Hamazaki, Miho Itomura, Tomohito Hamazaki

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 266 KB

english, 2010

26

LipidBank: Its recent changes

Masanori Arita, Etsuko Yasugi, Yousuke Seyama, Masahiro Nishijima

Journal:

Chemistry and Physics of Lipids

Année:

2007

Langue:

english

Fichier:

PDF, 91 KB

english, 2007

27

Nested structure acquired through simple evolutionary process

Kazuhiro Takemoto, Masanori Arita

Journal:

Journal of Theoretical Biology

Année:

2010

Langue:

english

Fichier:

PDF, 254 KB

english, 2010

28

Heterogeneous distribution of metabolites across plant species

Kazuhiro Takemoto, Masanori Arita

Journal:

Physica A: Statistical Mechanics and its Applications

Année:

2009

Langue:

english

Fichier:

PDF, 1.54 MB

english, 2009

29

Properties of the maximum -likelihood estimator for independent random variables

Yoshihiko Hasegawa, Masanori Arita

Journal:

Physica A: Statistical Mechanics and its Applications

Année:

2009

Langue:

english

Fichier:

PDF, 1.29 MB

english, 2009

30

EFFECTS OF LOCALLY ADMINISTERED ARGATROBAN ON RESTENOSIS AFTER BALLOON ANGIOPLASTY: EXPERIMENTAL AND CLINICAL STUDY

Toshio Imanishi, Mikio Arita, Yoshiaki Tomobuchi, Masanori Hamada, Takuzo Hano, Ichiro Nishio

Journal:

Clinical and Experimental Pharmacology and Physiology

Année:

1997

Langue:

english

Fichier:

PDF, 756 KB

english, 1997

31

Secret Signatures Inside Genomic DNA

Masanori Arita, Yoshiaki Ohashi

Journal:

Biotechnology Progress

Année:

2004

Langue:

english

Fichier:

PDF, 191 KB

english, 2004

32

Design and Synthesis of Novel DFG-Out RAF/Vascular Endothelial Growth Factor Receptor 2 (VEGFR2) Inhibitors. 1. Exploration of [5,6]-Fused Bicyclic Scaffolds

Miyazaki, Tohru, Arita, Takeo, Yabuki, Masato, Kakoi, Kazuyo, Kato, Juran, Okaniwa, Masanori, Hirose, Masaaki, Imada, Takashi, Ohashi, Tomohiro, Hayashi, Youko

Journal:

Journal of Medicinal Chemistry

Année:

2012

Langue:

english

Fichier:

PDF, 3.98 MB

english, 2012

33

Expression of meiotic genes in the germline progenitors of Drosophila embryos

Masanori Mukai, Yu Kitadate, Kayo Arita, Shuji Shigenobu, Satoru Kobayashi

Journal:

Gene Expression Patterns

Année:

2006

Langue:

english

Fichier:

PDF, 972 KB

english, 2006

34

Escape process and stochastic resonance under noise intensity fluctuation

Yoshihiko Hasegawa, Masanori Arita

Journal:

Physics Letters A

Année:

2011

Langue:

english

Fichier:

PDF, 534 KB

english, 2011

35

Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis

Henning Redestig, Miyako Kusano, Atsushi Fukushima, Fumio Matsuda, Kazuki Saito, Masanori Arita

Journal:

BMC Bioinformatics

Année:

2010

Langue:

english

Fichier:

PDF, 760 KB

english, 2010

36

Time-resolved metabolomics reveals metabolic modulation in rice foliage

Shigeru Sato, Masanori Arita, Tomoyoshi Soga, Takaaki Nishioka, Masaru Tomita

Journal:

BMC Systems Biology

Année:

2008

Langue:

english

Fichier:

PDF, 1.43 MB

english, 2008

37

Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics

Henning Redestig, Miyako Kusano, Kaworu Ebana, Makoto Kobayashi, Akira Oikawa, Yozo Okazaki, Fumio Matsuda, Masanori Arita, Naoko Fujita, Kazuki Saito

Journal:

BMC Systems Biology

Année:

2011

Langue:

english

Fichier:

PDF, 1.22 MB

english, 2011

38

Histopathology of Neovascular Tissue From Eyes With Proliferative Diabetic Retinopathy After Intravitreal Bevacizumab Injection

Ri-Ichiro Kohno, Yasuaki Hata, Yasutaka Mochizuki, Ryoichi Arita, Shuhei Kawahara, Takeshi Kita, Masanori Miyazaki, Toshio Hisatomi, Yasuhiro Ikeda, Lloyd Paul Aiello, Tatsuro Ishibashi

Journal:

American Journal of Ophthalmology

Année:

2010

Langue:

english

Fichier:

PDF, 2.00 MB

english, 2010

39

Design and synthesis of novel DFG-out RAF/vascular endothelial growth factor receptor 2 (VEGFR2) inhibitors: 2. Synthesis and characterization of a novel imide-type prodrug for improving oral absorption

Masanori Okaniwa, Takashi Imada, Tomohiro Ohashi, Tohru Miyazaki, Takeo Arita, Masato Yabuki, Akihiko Sumita, Shunichirou Tsutsumi, Keiko Higashikawa, Terufumi Takagi, Tomohiro Kawamoto, Yoshitaka Inu

Journal:

Bioorganic & Medicinal Chemistry

Année:

2012

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2012

40

Identification of cardiac myocytes as the target of interleukin 11, a cardioprotective cytokine

Ryusuke Kimura, Makiko Maeda, Atsushi Arita, Yuichi Oshima, Masanori Obana, Takashi Ito, Yasuhiro Yamamoto, Tomomi Mohri, Tadamitsu Kishimoto, Ichiro Kawase, Yasushi Fujio, Junichi Azuma

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 976 KB

english, 2007

41

Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes

Hideki Nagasaki, Masanori Arita, Tatsuya Nishizawa, Makiko Suwa, Osamu Gotoh

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 680 KB

english, 2005

42

Synthesis and Immunosuppressive Activity of 2-Substituted 2-Aminopropane-1,3-diols and 2-Aminoethanols 1,2

Kiuchi, Masatoshi, Adachi, Kunitomo, Kohara, Toshiyuki, Minoguchi, Masanori, Hanano, Tokushi, Aoki, Yoshiyuki, Mishina, Tadashi, Arita, Masafumi, Nakao, Noriyoshi, Ohtsuki, Makio, Hoshino, Yukio, Tesh

Journal:

Journal of Medicinal Chemistry

Année:

2000

Langue:

english

Fichier:

PDF, 275 KB

english, 2000

43

Design and synthesis of novel DFG-out RAF/vascular endothelial growth factor receptor 2 (VEGFR2) inhibitors: 3. Evaluation of 5-amino-linked thiazolo[5,4-d]pyrimidine and thiazolo[5,4-b]pyridine derivatives

Masaaki Hirose, Masanori Okaniwa, Tohru Miyazaki, Takashi Imada, Tomohiro Ohashi, Yuta Tanaka, Takeo Arita, Masato Yabuki, Tomohiro Kawamoto, Shunichirou Tsutsumi, Akihiko Sumita, Terufumi Takagi, Bi-

Journal:

Bioorganic & Medicinal Chemistry

Année:

2012

Langue:

english

Fichier:

PDF, 1.51 MB

english, 2012

44

MAMO, a maternal BTB/POZ-Zn-finger protein enriched in germline progenitors is required for the production of functional eggs in Drosophila

Masanori Mukai, Yoshiki Hayashi, Yu Kitadate, Shuji Shigenobu, Kayo Arita, Satoru Kobayashi

Journal:

Mechanisms of Development

Année:

2007

Langue:

english

Fichier:

PDF, 1.87 MB

english, 2007

45

The Transduodenal Endoscopic Treatment of Acute Cholangitis

Ryukichi AKASHI, Hiroshi YAMABE, Takeaki KIYOZUMI, Masanori HOKAMURA, Katsuro SAGARA, Sumi WAKI, Tetsumasa ARITA, Atsushi INAYOSHI, Nobuo HAYASHIDA, Yasushi YAGI, Tsunekazu IKEDA, Masahiro HATTORI

Journal:

Digestive Endoscopy

Année:

1990

Langue:

english

Fichier:

PDF, 714 KB

english, 1990

46

Unbiased characterization of genotype-dependent metabolic regulations by metabolomic approach inArabidopsis thaliana

Miyako Kusano, Atsushi Fukushima, Masanori Arita, Pär Jonsson, Thomas Moritz, Makoto Kobayashi, Naomi Hayashi, Takayuki Tohge, Kazuki Saito

Journal:

BMC Systems Biology

Année:

2007

Langue:

english

Fichier:

PDF, 2.03 MB

english, 2007

47

MRMPROBS: A Data Assessment and Metabolite Identification Tool for Large-Scale Multiple Reaction Monitoring Based Widely Targeted Metabolomics

Tsugawa, Hiroshi, Arita, Masanori, Kanazawa, Mitsuhiro, Ogiwara, Atsushi, Bamba, Takeshi, Fukusaki, Eiichiro

Journal:

Analytical Chemistry

Année:

2013

Langue:

english

Fichier:

PDF, 2.56 MB

english, 2013

48

Discovery of a Selective Kinase Inhibitor (TAK-632) Targeting Pan-RAF Inhibition: Design, Synthesis, and Biological Evaluation of C -7-Substituted 1,3-Benzothiazole Derivatives

Okaniwa, Masanori, Hirose, Masaaki, Arita, Takeo, Yabuki, Masato, Nakamura, Akito, Takagi, Terufumi, Kawamoto, Tomohiro, Uchiyama, Noriko, Sumita, Akihiko, Tsutsumi, Shunichirou, Tottori, Tsuneaki, In

Journal:

Journal of Medicinal Chemistry

Année:

2013

Langue:

english

Fichier:

PDF, 2.98 MB

english, 2013

49

[IEEE 2008 International Conference on Biomedical Engineering And Informatics (BMEI) - Sanya, China (2008.05.27-2008.05.30)] 2008 International Conference on BioMedical Engineering and Informatics - Comparison of ESI-MS Spectra in MassBank Database

Horai, Hisayuki, Arita, Masanori, Nishioka, Takaaki

Année:

2008

Langue:

english

Fichier:

PDF, 405 KB

english, 2008

50

Discovery of novel chiral diazepines as bombesin receptor subtype-3 (BRS-3) agonists with low brain penetration

Matsufuji, Tetsuyoshi, Shimada, Kousei, Kobayashi, Shozo, Kawamura, Asuka, Fujimoto, Teppei, Arita, Tsuyoshi, Hara, Takashi, Konishi, Masahiro, Abe-Ohya, Rie, Izumi, Masanori, Sogawa, Yoshitaka, Nagai

Journal:

Bioorganic & Medicinal Chemistry Letters

Année:

2014

Langue:

english

Fichier:

PDF, 1.41 MB

english, 2014